Tags

• microbubbles 1
• CFD 1
• BEM 1
• non-coalescence 2
• surface tension 3
• fluid jets 2
• biological fluid dynamics 1
• optimization 1
• copepodids 1
• energy dissipation 1
• nauplii 1
• Reynolds number 2
• swimming 4
• velocimetry 1
• breast stroke 1
• body size 2
• fluid physics 1
• ocean life 1
• sensing modes 1
• sensing range 1
• traits 1
• allometric scaling 1
• fish 1
• metabolism 1
• mixotrophy 1
• plankton 1
• whales 1
• bacterial flagellar motor 7
• molecular motor 1
• multisubunit complex 1
• regulated self-assembly 1
• grants 1
• chemotaxis 1
• cryo-electron 1
• ion channel 1
• microbiology 1
• microscopy 1
• motility 2
• stator unit 5
• structural biology 2
• torque generation 2
• preprint 4
• motor 1
• mechanosensing 2
• stator units 1
• talks 3
• publication 5
• bacterial motility 5
• flagellar motor 2
• self-assembly 1
• molecular motors 1
• Escherichia coli 1
• proton/sodium channel 1
• cryo-electron microscopy 2
• gliding 1
• twitching 1
• swarming 2
• sliding 1
• award 1
• mechano-adaptation 1
• remodeling 1
• people 31
• ion selectivity 1
• sodium 1
• funding 1
• PIV 1
• tracking 1
• dynamic masking 1
• pressure from PIV 1
• zooplankton 1
• biological physics 1
• optics 1
• physics 1
• proton motive force 1
• osmotic stress 1
• mechanical stress 1
• electrophysiology 1
• allostery 1
• stator remodeling 1
• molecular dynamics 1
• protein dynamics 1
• flagella 1
• fermentation 1
• flagellum 1
• type III secretion system 1
• Salmonella enterica 1

microbubbles

• A boundary element model of multiple microcirculatory bubbles in cardiovasculature

CFD

• A boundary element model of multiple microcirculatory bubbles in cardiovasculature

BEM

• A boundary element model of multiple microcirculatory bubbles in cardiovasculature

non-coalescence

• Noncoalescence in the oblique collision of fluid jets
• Non-coalescence of jets

surface tension

• Swashing Motility: A Propulsion-Independent form of Bacterial Surface Migration
• Noncoalescence in the oblique collision of fluid jets
• Non-coalescence of jets

fluid jets

• Noncoalescence in the oblique collision of fluid jets
• Non-coalescence of jets

biological fluid dynamics

• Flow disturbances generated by feeding and swimming zooplankton

optimization

• Flow disturbances generated by feeding and swimming zooplankton

copepodids

• Hydrodynamics and energetics of jumping copepod nauplii and copepodids

energy dissipation

• Hydrodynamics and energetics of jumping copepod nauplii and copepodids

nauplii

• Hydrodynamics and energetics of jumping copepod nauplii and copepodids

Reynolds number

• Quiet swimming at low Reynolds number
• Hydrodynamics and energetics of jumping copepod nauplii and copepodids

swimming

• Estimating the pressure force around swimming plankton using micro particle image velocimetry
• Bacterial motility: machinery and mechanisms
• Quiet swimming at low Reynolds number
• Hydrodynamics and energetics of jumping copepod nauplii and copepodids

velocimetry

• Hydrodynamics and energetics of jumping copepod nauplii and copepodids

breast stroke

• Quiet swimming at low Reynolds number

body size

• Characteristic sizes of life in the oceans, from bacteria to whales
• Size structures sensory hierarchy in ocean life

fluid physics

• Size structures sensory hierarchy in ocean life

ocean life

• Size structures sensory hierarchy in ocean life

sensing modes

• Size structures sensory hierarchy in ocean life

sensing range

• Size structures sensory hierarchy in ocean life

traits

• Size structures sensory hierarchy in ocean life

allometric scaling

• Characteristic sizes of life in the oceans, from bacteria to whales

fish

• Characteristic sizes of life in the oceans, from bacteria to whales

metabolism

• Characteristic sizes of life in the oceans, from bacteria to whales

mixotrophy

• Characteristic sizes of life in the oceans, from bacteria to whales

plankton

• Characteristic sizes of life in the oceans, from bacteria to whales

whales

• Characteristic sizes of life in the oceans, from bacteria to whales

bacterial flagellar motor

• Long-range coupling regulates stator dynamics in the bacterial flagellar motor
• Ion selectivity and rotor coupling of the Vibrio flagellar sodium-driven stator unit
• A multi-state dynamic process confers mechano-adaptation to a biological nanomachine
• Bacterial motility: machinery and mechanisms
• Structural basis of torque generation in the bi-directional bacterial flagellar motor
• Structure and function of stator units of the bacterial flagellar motor
• Torque-dependent remodeling of the bacterial flagellar motor

molecular motor

• Torque-dependent remodeling of the bacterial flagellar motor

multisubunit complex

• Torque-dependent remodeling of the bacterial flagellar motor

regulated self-assembly

• Torque-dependent remodeling of the bacterial flagellar motor

grants

• Navish receives NIH K99/R00 award!

chemotaxis

• Structure and function of stator units of the bacterial flagellar motor

cryo-electron

• Structure and function of stator units of the bacterial flagellar motor

ion channel

• Structure and function of stator units of the bacterial flagellar motor

microbiology

• Structure and function of stator units of the bacterial flagellar motor

microscopy

• Structure and function of stator units of the bacterial flagellar motor

motility

• Building the bacterial flagellum: coordinating regulation, dynamic assembly, and function
• Structure and function of stator units of the bacterial flagellar motor

stator unit

• Ion selectivity and rotor coupling of the Vibrio flagellar sodium-driven stator unit
• A multi-state dynamic process confers mechano-adaptation to a biological nanomachine
• Bacterial motility: machinery and mechanisms
• Structural basis of torque generation in the bi-directional bacterial flagellar motor
• Structure and function of stator units of the bacterial flagellar motor

structural biology

• Structural basis of torque generation in the bi-directional bacterial flagellar motor
• Structure and function of stator units of the bacterial flagellar motor

torque generation

• Structural basis of torque generation in the bi-directional bacterial flagellar motor
• Structure and function of stator units of the bacterial flagellar motor

preprint

• New Preprint
• New preprint
• New preprint
• New preprint uploaded on bioRxiv

motor

• Mechano-adaptation in the bacterial flagellar motor

mechanosensing

• Long-range coupling regulates stator dynamics in the bacterial flagellar motor
• Mechano-adaptation in the bacterial flagellar motor

stator units

• Mechano-adaptation in the bacterial flagellar motor

talks

• Talk at the EPFL Physics of Living Systems Seminar Series
• Talk at the Microscale Ocean Biophysics Seminar Series
• Talk at the 2021 APS March meeting

publication

• New paper out in Nature Communications
• Shabduli joins the lab!
• New review paper out in Nature Reviews Microbiology
• New review paper out in Trends in Biochemical Sciences
• New paper out in PNAS

bacterial motility

• Swashing Motility: A Propulsion-Independent form of Bacterial Surface Migration
• Long-range coupling regulates stator dynamics in the bacterial flagellar motor
• A multi-state dynamic process confers mechano-adaptation to a biological nanomachine
• Bacterial motility: machinery and mechanisms
• Mechanosensitive remodeling of the bacterial flagellar motor is independent of direction of rotation

flagellar motor

• Osmotic stress triggers fast and reversible PMF collapse in Escherichia coli
• Mechanosensitive remodeling of the bacterial flagellar motor is independent of direction of rotation

self-assembly

• Mechanosensitive remodeling of the bacterial flagellar motor is independent of direction of rotation

molecular motors

• Mechanosensitive remodeling of the bacterial flagellar motor is independent of direction of rotation

Escherichia coli

• Mechanosensitive remodeling of the bacterial flagellar motor is independent of direction of rotation

proton/sodium channel

• Structural basis of torque generation in the bi-directional bacterial flagellar motor

cryo-electron microscopy

• Bacterial motility: machinery and mechanisms
• Structural basis of torque generation in the bi-directional bacterial flagellar motor

gliding

• Bacterial motility: machinery and mechanisms

twitching

• Bacterial motility: machinery and mechanisms

swarming

• Swashing Motility: A Propulsion-Independent form of Bacterial Surface Migration
• Bacterial motility: machinery and mechanisms

sliding

• Bacterial motility: machinery and mechanisms

award

• Intersections Science Fellows

mechano-adaptation

• A multi-state dynamic process confers mechano-adaptation to a biological nanomachine

remodeling

• A multi-state dynamic process confers mechano-adaptation to a biological nanomachine

people

• Mrinmayee Bapat joins the lab
• Farhad Javi joins the lab
• Brennen presents at the Four Corners Meeting of the American Physical Society
• Shabduli was awarded the Biodesign Student Travel Grant
• Shabduli gets a scholarship to attend BLAST XVIII
• Shajeda Begum joins the lab
• Brennen and Seiga present at the annual CME retreat
• Prasanth Manohar visits our lab
• Frances heads off to NAU
• Luis and Seiga present at the BII-MCE seminar series
• Frances defends her Honors thesis
• Lab members participate in ASU Open Door 2024
• Navish and Shabduli present at the GRC Sensory Transduction in Microorganisms Meeting 2024 (STIM)
• Pranav Sharma joins the lab
• Seiga Yanagisawa joins the lab
• Wadhwa Lab Retreat 2023
• Eric and Shabduli present at the BII-MCE seminar series
• Brennen joins the lab
• Bibek and Rekha join the lab
• David Castillo joins the lab
• Shabduli wins poster award at BioPhest 2023
• Lab members present posters at BioPhest 2023
• Rebecca heads off to Cornell
• Lab members present posters at Biodesign Retreat 2023
• Rebecca wins the Department of Physics Research Award
• Carolina joins the lab
• Frances joins the lab
• David joins the lab
• Luis joins the lab
• Shabduli receives the Fulton Fellowship
• Rebecca and Eric join the lab

ion selectivity

• Ion selectivity and rotor coupling of the Vibrio flagellar sodium-driven stator unit

sodium

• Ion selectivity and rotor coupling of the Vibrio flagellar sodium-driven stator unit

funding

• New grant from from the NSF Biological Integration Institute for Mechanism of Cellular Evolution (BII-MCE)

PIV

• Estimating the pressure force around swimming plankton using micro particle image velocimetry

tracking

• Estimating the pressure force around swimming plankton using micro particle image velocimetry

dynamic masking

• Estimating the pressure force around swimming plankton using micro particle image velocimetry

pressure from PIV

• Estimating the pressure force around swimming plankton using micro particle image velocimetry

zooplankton

• Estimating the pressure force around swimming plankton using micro particle image velocimetry

biological physics

• Fourier synthesis optical diffraction tomography for kilohertz rate volumetric imaging

optics

• Fourier synthesis optical diffraction tomography for kilohertz rate volumetric imaging

physics

• Fourier synthesis optical diffraction tomography for kilohertz rate volumetric imaging

proton motive force

• Osmotic stress triggers fast and reversible PMF collapse in Escherichia coli

osmotic stress

• Osmotic stress triggers fast and reversible PMF collapse in Escherichia coli

mechanical stress

• Osmotic stress triggers fast and reversible PMF collapse in Escherichia coli

electrophysiology

• Osmotic stress triggers fast and reversible PMF collapse in Escherichia coli

allostery

• Long-range coupling regulates stator dynamics in the bacterial flagellar motor

stator remodeling

• Long-range coupling regulates stator dynamics in the bacterial flagellar motor

molecular dynamics

• Long-range coupling regulates stator dynamics in the bacterial flagellar motor

protein dynamics

• Long-range coupling regulates stator dynamics in the bacterial flagellar motor

flagella

• Swashing Motility: A Propulsion-Independent form of Bacterial Surface Migration

fermentation

• Swashing Motility: A Propulsion-Independent form of Bacterial Surface Migration

flagellum

• Building the bacterial flagellum: coordinating regulation, dynamic assembly, and function

type III secretion system

• Building the bacterial flagellum: coordinating regulation, dynamic assembly, and function

Salmonella enterica

• Building the bacterial flagellum: coordinating regulation, dynamic assembly, and function